BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D08LP1|AL430222
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig364 1563 0.0
>3x_Contig364
Length = 1428
Score = 1563 bits (788), Expect = 0.0
Identities = 799/802 (99%), Gaps = 1/802 (0%)
Strand = Plus / Plus
Query: 20 gatatagctggtggttcttctggcggtgccagaagaaa-ccagatcccattgtcgaagag 78
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 13 gatatagctggtggttcttctggcggtgccagaaaaaaaccagatcccattgtcgaagag 72
Query: 79 atcgagaatcgcagacaagaatactggtgtcaacattcaaaaccagatggatgattcgtt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atcgagaatcgcagacaagaatactggtgtcaacattcaaaaccagatggatgattcgtt 132
Query: 139 cattggaatgaccggtggtgagatcttccacgagatgatgcaacgtcacaacgtcgacac 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cattggaatgaccggtggtgagatcttccacgagatgatgcaacgtcacaacgtcgacac 192
Query: 199 cgtttttggataccctggtggtgcgattttgcccgtgtacgacgcaatctacaactcaga 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgtttttggataccctggtggtgcgattttgcccgtgtacgacgcaatctacaactcaga 252
Query: 259 taaattcacttttgttctaccaaaacatgaacaaggtgcaggtcacatggcagagggata 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taaattcacttttgttctaccaaaacatgaacaaggtgcaggtcacatggcagagggata 312
Query: 319 cgcaagagcctcagggaaaccaggtgttgttttggtgacttcaggtccaggtgcgactaa 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgcaagagcctcagggaaaccaggtgttgttttggtgacttcaggtccaggtgcgactaa 372
Query: 379 tgtggtgactcctatggcagatgcattggcagacggtgtgccgttggtggtgtttacagg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgtggtgactcctatggcagatgcattggcagacggtgtgccgttggtggtgtttacagg 432
Query: 439 tcaagtggccacgtcagctatcggaacagatgctttccaagaagcagatgtggttggtat 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcaagtggccacgtcagctatcggaacagatgctttccaagaagcagatgtggttggtat 492
Query: 499 ctctagatcttgtaccaaatggaacgtgatggtgaaaaccattgaggaactgcctcgtag 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctctagatcttgtaccaaatggaacgtgatggtgaaaaccattgaggaactgcctcgtag 552
Query: 559 aatcaacgaagcgtttgamatcgcaacttccggtagaccgggccccgttttggtggattt 618
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aatcaacgaagcgtttgaaatcgcaacttccggtagaccgggccccgttttggtggattt 612
Query: 619 accaaaggacgtgacggcggcggtgctaagaaacccaattccaatgaagtctattctacc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 accaaaggacgtgacggcggcggtgctaagaaacccaattccaatgaagtctattctacc 672
Query: 679 atctgatactctaaatcagttgactcaaagagtcgtcgatgagttcactttggaaaacat 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atctgatactctaaatcagttgactcaaagagtcgtcgatgagttcactttggaaaacat 732
Query: 739 tagcagggctgctgacttgatcaacagggctaagaagcctttgctatacgtgggtgctgg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tagcagggctgctgacttgatcaacagggctaagaagcctttgctatacgtgggtgctgg 792
Query: 799 tattctaggcagcgaaatgggt 820
||||||||||||||||||||||
Sbjct: 793 tattctaggcagcgaaatgggt 814
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5136
Number of Sequences: 1807
Number of extensions: 5136
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)